PyBEL Logo
v0.14.9

Getting Started

  • Overview
  • Installation

Data Structure

  • Data Model
  • Example Networks
  • Summary
  • Operations
  • Filters
  • Transformations
  • Grouping
  • Pipeline

Conversion

  • Input and Output

Database

  • Manager
  • Models

Topic Guide

  • Cookbook
  • Command Line Interface

Reference

  • Constants
  • Parsers
  • Internal Domain Specific Language
  • Logging Messages

Project

  • References
  • Roadmap
  • Current Issues
  • Technology
PyBEL
  • Docs »
  • Overview: module code

All modules for which code is available

  • functools
  • pybel.canonicalize
  • pybel.constants
  • pybel.dsl.node_classes
  • pybel.exceptions
  • pybel.io.api
  • pybel.io.bel_commons_client
  • pybel.io.biodati_client
  • pybel.io.cx
  • pybel.io.extras
  • pybel.io.fraunhofer_orientdb
  • pybel.io.gpickle
  • pybel.io.graphdati
  • pybel.io.graphml
  • pybel.io.hetionet.hetionet
  • pybel.io.hipathia
  • pybel.io.indra
  • pybel.io.jgif
  • pybel.io.jupyter.inline
  • pybel.io.line_utils
  • pybel.io.lines
  • pybel.io.neo4j
  • pybel.io.nodelink
  • pybel.io.pynpa
  • pybel.io.spia
  • pybel.io.tsv.api
  • pybel.io.umbrella_nodelink
  • pybel.language
  • pybel.manager.base_manager
  • pybel.manager.cache_manager
  • pybel.manager.database_io
  • pybel.manager.models
  • pybel.manager.query_manager
  • pybel.parser.exc
  • pybel.parser.parse_bel
  • pybel.parser.parse_concept
  • pybel.parser.parse_control
  • pybel.parser.parse_metadata
  • pybel.struct.graph
  • pybel.struct.grouping.annotations
  • pybel.struct.grouping.provenance
  • pybel.struct.operations
  • pybel.struct.pipeline.decorators
  • pybel.struct.pipeline.exc
  • pybel.struct.pipeline.pipeline
  • pybel.struct.summary.edge_summary
  • pybel.struct.summary.errors
  • pybel.struct.summary.node_summary
  • pybel.struct.summary.provenance
  • pybel.tokens
  • sqlalchemy.ext.declarative.api
  • sqlalchemy.orm.attributes

© Copyright 2016-2019, Charles Tapley Hoyt Revision 91e1cd4d.

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